- 1. Introduction
- 2. Data analysis
- 2.1. General analysis workflow
- 2.2. Analysis of high-density genomic data
- 2.2.1. DNA microarrays
- 2.2.1.1. Basic principle of DNA microarrays
- 2.2.1.2. Microarray production
- 2.2.1.3. Types of microarrays
- 2.2.1.4. Design of microarray experiments
- 2.2.1.5. Data pre-processing
- 2.2.1.6. Normalization
- 2.2.1.7. Analysis of expression arrays
- 2.2.1.8. Analysis of arrayCGH
- 2.2.1.9. Example
- 2.2.1.10. Meta-analysis of microarray experiments
- 2.2.1.11. Pathway Analysis
- 2.2.2. DNA sequence analysis
- 2.2.1. DNA microarrays
- 2.3. Analysis of high-density proteomic data
- 3. Software
E-learning in analysis of genomic and proteomic data 2. Data analysis 2.2. Analysis of high-density genomic data 2.2.1. DNA microarrays 2.2.1.11. Pathway Analysis
Author of the chapter 2.2.1.11:
Claus-Dieter Mayer
Biomathematics and Statistics Scotland (BioSS)
Rowett Institute of Nutrition and Health
Aberdeen University
For the methods on Pathway and Gene Set Analysis of Microarray Data please, see this presentation (author Claus-Dieter Mayer).